PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005697.1_g000011.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 216aa    MW: 25040.5 Da    PI: 9.3979
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005697.1_g000011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1941.9e-2951138290
                       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 
                                fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+++ k+ +++r++ra tr gCka+++vk+ek+gkw vt++ ++H
  Rmu_sc0005697.1_g000011.1  51 FYDAYATQLGFIMRVDAFRRSLRDGKVVWRRLVCNKEGFRKTRPKR-SENRKPRAITREGCKAMIVVKREKSGKWIVTRFIKDH 133
                                9*******************************************99.9************************************ PP

                       FAR1  86 nHela 90 
                                nH+l+
  Rmu_sc0005697.1_g000011.1 134 NHSLV 138
                                **996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
LPTMDEQPST SKDEDMIESS NGKEAATFEG SSDMEPYVGM EFETEEAAKV FYDAYATQLG  60
FIMRVDAFRR SLRDGKVVWR RLVCNKEGFR KTRPKRSENR KPRAITREGC KAMIVVKREK  120
SGKWIVTRFI KDHNHSLVVT PANGRRTVIL SQTPDEKDMK IRELTAELQR ERKRSAAYQE  180
QLDMVLREME EHSDHLSRNI ADIVQSVKEI ESKRIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-94FAR1 family protein