PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0005580.1_g000009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 146aa MW: 16618 Da PI: 10.1142 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 34.2 | 8.6e-11 | 79 | 143 | 2 | 67 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklk 67 Y++Y+ +GF rk+++ + +g+i +r++ C+k+g+r+++ + + r++r+ tr++Ckak++ Rmu_sc0005580.1_g000009.1 79 LYSAYSLALGFGFRKDTKGEA--EGTIRRRQWLCNKQGTRAKKWFIlDGRGRTPRKITRVNCKAKFT 143 7**************997776..999**************99876667899*************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MEMGTNSDPS ISLHATRHKT GQTRLERIDG SCGFWVCGIE IEEQGFGDWD LTLRFGVFGL 60 KVEDVKAMTF KTVEDAERLY SAYSLALGFG FRKDTKGEAE GTIRRRQWLC NKQGTRAKKW 120 FILDGRGRTP RKITRVNCKA KFTTSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-07 | FAR1 family protein |