PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0005394.1_g000009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 258aa MW: 29700 Da PI: 8.9321 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 55 | 2.8e-17 | 121 | 229 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkak 65 kfY+ Y++ +GFs+r++++ + r++ +++r++vCsk+gk++ + kk +++ r + +r+gC a Rmu_sc0005394.1_g000009.1 121 KFYHLYSRVIGFSTRRDRKVRAYRSEFVIRREWVCSKQGKATIKVKKqgvkekgnspiqaekkkmkRNQCPRGKRYSRVGCMAA 204 6*****************************************999999***********998766555556688999******* PP FAR1 66 lkvkkek.dgkwevtkleleHnHel 89 + ++ k ++k+ v+k++++HnH++ Rmu_sc0005394.1_g000009.1 205 FGIRYCKeRKKYFVSKFVTNHNHDV 229 *****999***************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MQVNMRTTKQ VYATLTICTT ARLRYTDHLY HNSLLSDEEV SDDDCLLRIG EDKEGLFCDG 60 GEKGLGQTSE IGNDKCYMMD MEMLEGMNVG ECVDLNGKDY SNLNMDDMKD VVFSSVCEVE 120 KFYHLYSRVI GFSTRRDRKV RAYRSEFVIR REWVCSKQGK ATIKVKKQGV KEKGNSPIQA 180 EKKKMKRNQC PRGKRYSRVG CMAAFGIRYC KERKKYFVSK FVTNHNHDVA VSEEVQFLRS 240 HRGVNDSVIA QVEALQKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-14 | FAR1 family protein |