PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005294.1_g000047.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 356aa MW: 39958 Da PI: 6.8998

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005294.1_g000047.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	50.4	4.3e-16	207	245	21	59
-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 21 prsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +sYYrCt+++C vkk+vers +dp++v++tYeg+Hnh+ Rmu_sc0005294.1_g000047.1 207 RKSYYRCTTQKCLVKKRVERSFQDPTIVITTYEGQHNHQ 245 57************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MSKEKKSPYL QYDPFDYNPH EIDRSSFPFF NYGSNSSIYN IPQTPADPQT QNLHGFESDP 60 SYLMSFADCL NGSVDYTTLS KAFDISCSSS EVISPPLLDQ DDNSNTKAVA AGVGDQNPST 120 PNSSLSCSSN EAGAANHEHG NDQDSDKISK KDKHPKVVQS EEAPGDHEDK SKKVNKAKKK 180 EKRQREPRFA FLTKSEIDHL EDGYRWRKSY YRCTTQKCLV KKRVERSFQD PTIVITTYEG 240 QHNHQCPATL RGSINAVGML SPSFLASAAS GGFGTSNNES PRFPHELLLT QLLTPVNNNQ 300 LQLQAHHHHD PASSMLYSNL MNTLHQNQQQ QQQLHVPHDY NMLQNLASSF SHKEKP

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MSKEKKSPYL QYDPFDYNPH EIDRSSFPFF NYGSNSSIYN IPQTPADPQT QNLHGFESDP  60
SYLMSFADCL NGSVDYTTLS KAFDISCSSS EVISPPLLDQ DDNSNTKAVA AGVGDQNPST  120
PNSSLSCSSN EAGAANHEHG NDQDSDKISK KDKHPKVVQS EEAPGDHEDK SKKVNKAKKK  180
EKRQREPRFA FLTKSEIDHL EDGYRWRKSY YRCTTQKCLV KKRVERSFQD PTIVITTYEG  240
QHNHQCPATL RGSINAVGML SPSFLASAAS GGFGTSNNES PRFPHELLLT QLLTPVNNNQ  300
LQLQAHHHHD PASSMLYSNL MNTLHQNQQQ QQQLHVPHDY NMLQNLASSF SHKEKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	185	KEKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18170.1	1e-37	WRKY family protein