PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005241.1_g000008.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 238aa MW: 27155.6 Da PI: 9.2029

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005241.1_g000008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.3	1.4e-32	161	219	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ Rmu_sc0005241.1_g000008.1 161 LDDGYKWRKYGQKVVKNTQHPRSYYRCTMDNCRVKKRVERLAEDPRMVITTYEGRHVHS 219 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MLNQQGLFDQ NQDQAPIQMG FFSYPPNNLT FSSLGCQQSL KALSSLPSSL GSDDHHAPST 60 NLSETLIPSL NIPLKHREAH ITSDFGGSQL LSLQRSSANL WSWGDQVSEC LSSKRSSGDI 120 HDHHHVGLGV SAMKMKKIKA IRRKVREPRF CFKTMSEVDV LDDGYKWRKY GQKVVKNTQH 180 PRSYYRCTMD NCRVKKRVER LAEDPRMVIT TYEGRHVHSP SHDLEDSQSP SHLNNFFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	5e-55	WRKY family protein