PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005198.1_g000003.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 300aa MW: 34570.9 Da PI: 5.3474

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005198.1_g000003.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.9	1.4e-17	63	148	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 k+Y++Y+k +GF+v+ ++s+k ++ge + tf+Cs+ gkr++++++ + + +++ + +C+ak++v++ dgk v++++le Rmu_sc0005198.1_g000003.1 63 KYYKSYGKGIGFEVCERTSSKG-DDGELKYITFTCSRFGKRSSKSRH---AFKLQPVAKSDCRAKFNVNLLPDGKRLVSSIVLE 142 69*************99997.9999************9888...9999************************** PP FAR1 85 HnHela 90 HnH+l+ Rmu_sc0005198.1_g000003.1 143 HNHDLS 148 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MESVENEMDT IYMEENMECG DEVETERSNV EIDIETTGNE TVTEKVKEPE IGLVFDSIDE 60 LEKYYKSYGK GIGFEVCERT SSKGDDGELK YITFTCSRFG KRSSKSRHAF KLQPVAKSDC 120 RAKFNVNLLP DGKRLVSSIV LEHNHDLSTP SKRRFYKSSR ELPPHVKKRL ATNDIAGLRP 180 KKNFNSFVVE AGGHENITFL EKDVINFLDK VRRLRLGEGD ATAIQKYFLK MQADNSNFFY 240 LMDINEEGRL RNVFWENTRS RAAYEEFGDA VTFDTTYLTN KYDMPFAPFV GVNIMGNQYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-43	FAR1 family protein