PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0005038.1_g000005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 290aa MW: 33022.7 Da PI: 4.8888 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.9 | 1.5e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g+ R++k+c++rw +yl Rmu_sc0005038.1_g000005.1 14 KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.9 | 4.2e-17 | 70 | 111 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ E++ +d+++qlG++ W++Ia++++ gRt++++k++w+++ Rmu_sc0005038.1_g000005.1 70 LSEHEEKMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111 5899***************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MGRQPCCDKV GLKKGPWTAE EDKKLINFIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SEHEEKMVID LHAQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLKKMG 120 IDPLTHKPLP NGNEIENQSQ QKQHIQNDQE QQQQEEEQSC TATDDTFEID QINEGGKVED 180 KVEFVTMDHD DHELLNGFCI DEVPLIEPHE IHLVPNCAPS SSTSSSSSCS NSSSNFLEDL 240 QYLPDFGWPN CDYSSSSNNN NDIIINNDTM GLWDDDFSSW GQESWAFGVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16600.1 | 1e-90 | MYB family protein |