PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004898.1_g000006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 296aa MW: 32615.5 Da PI: 8.8923 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.2 | 7.7e-18 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed++l ++q+G g+W++ +++ g+ R++k+c++rw++yl Rmu_sc0004898.1_g000006.1 19 RGPWTPQEDKKLFAFIQQHGHGSWRSLPEKAGLQRCGKSCRLRWRNYL 66 89*********************************************7 PP | |||||||
2 | Myb_DNA-binding | 51.8 | 1.9e-16 | 72 | 117 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +Ed+ +++++++lG++ W++Ia+ ++ +Rt++++k++w+++l Rmu_sc0004898.1_g000006.1 72 RGNFSLQEDQTIIQLHALLGNR-WSAIAANLP-RRTDNEIKNYWNTHL 117 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MGKSRTLTNS TATTSEIKRG PWTPQEDKKL FAFIQQHGHG SWRSLPEKAG LQRCGKSCRL 60 RWRNYLNPAI KRGNFSLQED QTIIQLHALL GNRWSAIAAN LPRRTDNEIK NYWNTHLKKR 120 LAKTGFDPVT HKPKTAILAS ANGDPKNLSN LSHIAQWESA RLQAEARFNM GTLMMSKSLA 180 AGGGGGDEAG GDGRATNVVQ EVGSFCNFDG VLGNNGRQFE APKLTKSAAP DFNGVSEESG 240 TDEYGDLFEA LLLQQSYTNT GFDVVDAWTL EQCNDISADY QNVIMSGGLK NPFMFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01140.1 | 5e-86 | MYB family protein |