PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004855.1_g000009.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

HB-other

Protein Properties

Length: 332aa MW: 36819.4 Da PI: 5.8283

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004855.1_g000009.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.4	1.2e-08	259	291	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yps+ ++ LA+++gLt +q+ +WF N+R ++ Rmu_sc0004855.1_g000009.1 259 PYPSEPQKFGLAASTGLTVKQINNWFINQRKRH 291 8*****************************885 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MEGGSNNCNS KYYSHGVMGS GSSSGMLMPP PPVNSYATAA DQTSSSSNQQ HYVSLPFTNI 60 NPNQNDSQEY EMSMKAKIMG HPLFPRLLAS YVNCQKVGAP AEVVARLEHA AAASISYAAA 120 ISEACEESEP DPELDQFMEA YCEMLAKYHE ELTKPFHEAM LGLSKINSQL KALSVSPSYS 180 ASTGDLVRQS GSSEEADVNE SGIDPRAEDW DIKAKLLQKY GGCLGSLSQE LKQKKKNGKL 240 PKEARVQLQE WWSRNYTWPY PSEPQKFGLA ASTGLTVKQI NNWFINQRKR HWKPSSEGMQ 300 LAMVDVDHPQ FYYMDHLICN PLPMDCTSTP LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	2e-87	TALE family protein