PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004768.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 181aa    MW: 19610.2 Da    PI: 8.8475
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004768.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-1996147156
                        AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                s y+GVr+++  g+WvAeIrd       r  + +lg+f taeeAa+a++ a+++++g+
  Rmu_sc0004768.1_g000002.1  96 SNYRGVRQRP-GGKWVAEIRDrR-----RaVQLWLGTFQTAEEAARAYDMAALEFRGA 147
                                57********.9*********33.....47*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MQSHSGCLPK EQEHAVIVSA LKWVIRGGTQ PPPPPSTPNS ATSSLPPTGG TNQVVIPFLD  60
CVTCQVCNMK MDDCLGCGLF PPSEEDKGKG KKMKTSNYRG VRQRPGGKWV AEIRDRRRAV  120
QLWLGTFQTA EEAARAYDMA ALEFRGADRA KLNFPPSSDT GSTSGAMTDD PNKSSRRDPS  180
T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.15e-21ERF family protein