PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004729.1_g000022.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 305aa    MW: 33132.4 Da    PI: 10.5208
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004729.1_g000022.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.58.5e-31227285259
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                +D+++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+++dp+++++tYe eH+h+
  Rmu_sc0004729.1_g000022.1 227 SDEFSWRKYGQKPIKGSPYPRGYYKCSSVrGCPARKHVERAQDDPTMLIVTYEAEHRHP 285
                                69*************************988****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MAIDLVRFSK IDDRTAMEEA ASAGLQSMEH LIRVLSSQTP SHNNLDCREI TDFTVAKFKQ  60
FISVLNRTGH ARFRRGPAKQ PSESTTTSSP PPPPPANPAP PKPQVTLSFE TGNPNTNTNT  120
ITHSKSKDCL TLSPPMSTTS SFLSSVTTGD GSVSNGKVFS SAAVPPAPAF SAGKPPLSQS  180
HRKRCHDELA TKTTSSGRCH CSKRRKSKVK RTVRVPAISS KIADIPSDEF SWRKYGQKPI  240
KGSPYPRGYY KCSSVRGCPA RKHVERAQDD PTMLIVTYEA EHRHPHPQQS NSVPAGAVGL  300
VFQSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-51WRKY family protein