PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004704.1_g000010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 174aa MW: 19167.2 Da PI: 7.1815 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 34.2 | 5.1e-11 | 31 | 52 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK+v+g+++p Rmu_sc0004704.1_g000010.1 31 LDDGYRWRKYGQKVVRGNPNPS 52 59******************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MDVGGIDVTP VVKPIREPQV VVHTPSEVDI LDDGYRWRKY GQKVVRGNPN PSARTSSHDT 60 LGPTTLNAPS RIRADENDTI SLDLGVGMSS TSENRSNNHL RLHSELAERQ THPSFNFKAV 120 QTTPAPSYYG VLNSGMNQYG SRENPSESRS IEIPPLNHSS YPYPQTMGRV LTGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26640.1 | 2e-54 | WRKY family protein |