PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004704.1_g000005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 538aa MW: 58887.1 Da PI: 7.6811 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.5 | 4.4e-31 | 180 | 237 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ +++++ei+Y+g+H+h+k Rmu_sc0004704.1_g000005.1 180 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-EGHITEIIYKGTHDHPK 237 8****************************************.***************85 PP | |||||||
2 | WRKY | 106.4 | 1.5e-33 | 355 | 413 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ Rmu_sc0004704.1_g000005.1 355 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 413 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 538 aa Download sequence |
MSPAKLPISR SPCLTIPPGL TPTSFLESPV LLSNMKAEPS PTTGSFLNPK MVYGTANSTY 60 SATMVCSDER NSGSFEFKPH SRLNMVTTDY DRQSNEQAVQ VQGQGQGQSQ SLASPPLVKS 120 EMAGSSNQSG LPAPVHMVSS GASAPVEGDA DDISQRANPN SGVQTSQFDH KGSGPSVSSD 180 DGYNWRKYGQ KHVKGSEFPR SYYKCTHPNC EVKKLFERSH EGHITEIIYK GTHDHPKPQP 240 SRRYNTGAMM NVQEERSDKA LSLTGRDDKS SSMYGQMSCT NEPNSTPELS PVRGNDGSVE 300 GTGSLSTRIL DEVDDDDPFS KRRRMDVGGI DVTPVVKPIR EPRVVVQTLS EVDILDDGYR 360 WRKYGQKVVR GNPNPRSYYK CTNAGCPVRK HVERASHDPK AVITTYEGKH NHDVPTARTS 420 SHDTSGPTTV NAPSRIRTEE NDTISLDLGV GMSSAAENRS NNHLRLHSEL AERQTHPSSN 480 FKAVQTTPAP SYYGVLNSGM NQYGSRENPS ESRSIEIPPL NHSSYPYPQN MGRVLTGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26640.2 | 0.0 | WRKY family protein |