PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004704.1_g000005.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 538aa    MW: 58887.1 Da    PI: 7.6811
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004704.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.54.4e-31180237260
                                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                                dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk  ers+ +++++ei+Y+g+H+h+k
  Rmu_sc0004704.1_g000005.1 180 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-EGHITEIIYKGTHDHPK 237
                                8****************************************.***************85 PP

2WRKY106.41.5e-33355413159
                                ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  Rmu_sc0004704.1_g000005.1 355 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 413
                                59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    
MSPAKLPISR SPCLTIPPGL TPTSFLESPV LLSNMKAEPS PTTGSFLNPK MVYGTANSTY  60
SATMVCSDER NSGSFEFKPH SRLNMVTTDY DRQSNEQAVQ VQGQGQGQSQ SLASPPLVKS  120
EMAGSSNQSG LPAPVHMVSS GASAPVEGDA DDISQRANPN SGVQTSQFDH KGSGPSVSSD  180
DGYNWRKYGQ KHVKGSEFPR SYYKCTHPNC EVKKLFERSH EGHITEIIYK GTHDHPKPQP  240
SRRYNTGAMM NVQEERSDKA LSLTGRDDKS SSMYGQMSCT NEPNSTPELS PVRGNDGSVE  300
GTGSLSTRIL DEVDDDDPFS KRRRMDVGGI DVTPVVKPIR EPRVVVQTLS EVDILDDGYR  360
WRKYGQKVVR GNPNPRSYYK CTNAGCPVRK HVERASHDPK AVITTYEGKH NHDVPTARTS  420
SHDTSGPTTV NAPSRIRTEE NDTISLDLGV GMSSAAENRS NNHLRLHSEL AERQTHPSSN  480
FKAVQTTPAP SYYGVLNSGM NQYGSRENPS ESRSIEIPPL NHSSYPYPQN MGRVLTGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.20.0WRKY family protein