PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004702.1_g000008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 231aa MW: 26209.1 Da PI: 9.7009 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 55.4 | 2e-17 | 90 | 179 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +fY++Y+ +GF rk+++ + +g i +r++ C+k+g+r+++ + + r +r t+++Ckak++v+ ++ g ++v+ ++ Rmu_sc0004702.1_g000008.1 90 RFYSAYSLALGFGFRKDTKGEV--KGMIRRRQWLCNKQGTRAKKWFIlDGRGRPPRRITKVNCKAKFRVNYNEiVGAYMVKAFV 171 5****************98887..999**************9987666789999****************************** PP FAR1 83 leHnHela 90 eH+Hela Rmu_sc0004702.1_g000008.1 172 PEHSHELA 179 ******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
LCPASPISIL SLPHLSLAQL LCYLSSLIYP HLSETEASID NTTKGCSKEG TRADETRTDD 60 EAFNYVPDYR RLKVEDVKAM TLKTVEDAER FYSAYSLALG FGFRKDTKGE VKGMIRRRQW 120 LCNKQGTRAK KWFILDGRGR PPRRITKVNC KAKFRVNYNE IVGAYMVKAF VPEHSHELAT 180 GNQTAFIRSH RNVCKSDLPH ANTMSKVSIR PCHAYEYMVE QAGGYKTVGF T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-17 | FAR1 family protein |