PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004657.1_g000024.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 159aa    MW: 17415.5 Da    PI: 4.5107
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004657.1_g000024.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.77.9e-153451156
                        AP2 11 krgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                                +g+Wv eIr+p+++    r++lg+++t++eAa+a++aa  +++ge
  Rmu_sc0004657.1_g000024.1  3 AWGKWVTEIRVPKSG---GRIWLGSYDTPDEAARAYDAAVYCIYGE 45
                               6**********9543...8**********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MRAWGKWVTE IRVPKSGGRI WLGSYDTPDE AARAYDAAVY CIYGECGRFN FPDFRRPVLP  60
AGSTVSLSKG DIQQIAMKFA SANVPESLPV SATVKTEVQA DTPASPNVLV SKDMASAYEV  120
KVDPLAPTYA SGAGSADPHE DFHLDDFRML DTDWIADFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.14e-44ERF family protein