PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004618.1_g000040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 182aa MW: 20146.7 Da PI: 5.281 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.1 | 5e-19 | 10 | 59 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+Wv+eIr+p gk++r++lg++ +e+Aa+a++aa++ l+g Rmu_sc0004618.1_g000040.1 10 KYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYEAPEMAAAAYDAAALHLRG 59 8*****999.**********8...557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MEEVHEPAVK YRGVRKRKWG KWVSEIREPG KKTRIWLGSY EAPEMAAAAY DAAALHLRGP 60 GVLLNFPEMV DSLPRPASSS PSDVQLTAQE AAMRFRRLPM GSVSTEVAGG SSGGAAPVTV 120 GLSPSQIQAI NESPLDSPKM WMQYMYMSHR DEALFFGEDM PSSMGFYDDH DEGLQHQSIW 180 DS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33760.1 | 2e-46 | ERF family protein |