PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004267.1_g000019.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 325aa MW: 37214.1 Da PI: 5.9351

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004267.1_g000019.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	79.5	3.7e-25	144	205	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYGqK++ ++++pr+Y+rCt++ gC+++k+v+r +++p+++ +tY g+H+++ Rmu_sc0004267.1_g000019.1 144 VDDGHAWRKYGQKMILNTRHPRNYFRCTHKfdqGCKATKHVQRIKDEPQLFRTTYYGNHTCT 205 59*************************9999*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MEWTWPESVS SNRQRVVEEL VQGREMVNQL QRCLRGDVRS AEGLVTKILG SFTNTLRILN 60 GSEEAKEELI SQIQANSPTS TVTASGSAAA GTDSLSWDAL DDAGKSEDSN EESYKSTETF 120 KDRRGSYKRR KTSHSWTKDT LDLVDDGHAW RKYGQKMILN TRHPRNYFRC THKFDQGCKA 180 TKHVQRIKDE PQLFRTTYYG NHTCTDYLRA PELILDSSSS QDSSKNMIRF DNTNNDFTRK 240 QEHPFFSSFT SIKKESVKEE EMITPINDHD HVIHHNQQLS SCDYLMSPGL GVFESSASTI 300 AYDHEDVFSR IMVGCFDDEV DFPYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	2e-40	WRKY family protein