PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004243.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 194aa    MW: 21750.4 Da    PI: 7.6062
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004243.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.3e-19555155
                        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                               ++++GVr+++ +g+Wv+eIr+p        +r++lg+f +aeeAa+a+++a+  + g
  Rmu_sc0004243.1_g000002.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFESAEEAARAYDEAAILMSG 55
                               59*******9.**********8.....334*********************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFESAE EAARAYDEAA ILMSGRNAKT  60
NFPVTTNEIA AASKDPINKS NSNSPSSSLS AILSAKLRKC CKSPSPSLTC LRLDTENSHI  120
GVWQKRAGPR SDSNWLMMVE LGQKSDLKEE KEESTSAPEL PDGHETEGVH GGDDRLHEEE  180
RIALQMIEEL LNRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.19e-68ERF family protein