PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004184.1_g000009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 441aa MW: 49428 Da PI: 4.9566 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.6 | 4.1e-20 | 124 | 173 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdp gkr r +lg+f+taeeAa +++a+ kl+g Rmu_sc0004184.1_g000009.1 124 KFRGVRQRP-WGKWAAEIRDP---GKRVRLWLGTFDTAEEAAMVYDNAAIKLRG 173 89*******.**********9...557*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 441 aa Download sequence |
MEMESSSFLC PIKYTQHRNT TKKLTKPSRK IEPGTSIAPK IIRISMTDHD ATDSSSDEEE 60 TEYYFGRRRV KKYINEISIE TDLRTNPAIT NNGRKRPALE TRPATRRPAQ KNSCPPANGG 120 GNRKFRGVRQ RPWGKWAAEI RDPGKRVRLW LGTFDTAEEA AMVYDNAAIK LRGPDAQTNF 180 SPPQMVGTVA DKVDDQNIVN EVEIEPETTP NVTVSVSGYD SGEETHHLSS PTSVLQFRTH 240 PIEEAEPELE KTALLSKPTE KVNHVRECGV EHNQIPTELR HRSETTPNVT VSVSGYDSGE 300 ETHHLSSPTS VLQFQTHPIE EAEPPQLEKT ALPSKPTEKV NHVRDCGVEH NQIPMELRYM 360 EEDAFRFPTP ESPLFESPHF FESPFFDDSA AVAGPLLFDD FCDLYAFADS SFSAQATSSM 420 MTCQGDDCFQ DIFGSDPLVV L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 8e-50 | ERF family protein |