PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004184.1_g000009.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 441aa    MW: 49428 Da    PI: 4.9566
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004184.1_g000009.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.1e-20124173255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +++GVr+++ +g+W+AeIrdp   gkr r +lg+f+taeeAa  +++a+ kl+g
  Rmu_sc0004184.1_g000009.1 124 KFRGVRQRP-WGKWAAEIRDP---GKRVRLWLGTFDTAEEAAMVYDNAAIKLRG 173
                                89*******.**********9...557*************************99 PP

Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MEMESSSFLC PIKYTQHRNT TKKLTKPSRK IEPGTSIAPK IIRISMTDHD ATDSSSDEEE  60
TEYYFGRRRV KKYINEISIE TDLRTNPAIT NNGRKRPALE TRPATRRPAQ KNSCPPANGG  120
GNRKFRGVRQ RPWGKWAAEI RDPGKRVRLW LGTFDTAEEA AMVYDNAAIK LRGPDAQTNF  180
SPPQMVGTVA DKVDDQNIVN EVEIEPETTP NVTVSVSGYD SGEETHHLSS PTSVLQFRTH  240
PIEEAEPELE KTALLSKPTE KVNHVRECGV EHNQIPTELR HRSETTPNVT VSVSGYDSGE  300
ETHHLSSPTS VLQFQTHPIE EAEPPQLEKT ALPSKPTEKV NHVRDCGVEH NQIPMELRYM  360
EEDAFRFPTP ESPLFESPHF FESPFFDDSA AVAGPLLFDD FCDLYAFADS SFSAQATSSM  420
MTCQGDDCFQ DIFGSDPLVV L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.18e-50ERF family protein