PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004132.1_g000011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 362aa MW: 40808.1 Da PI: 6.8735 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 62.9 | 6.4e-20 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv++++q+G g+W++ ++ g++R++k+c++rw +yl Rmu_sc0004132.1_g000011.1 14 KGPWTPEEDQKLVQYIQQHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.1 | 2.3e-14 | 67 | 145 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT................................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg................................tWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ +W++Ia ++ gRt++++k++w+++l Rmu_sc0004132.1_g000011.1 67 RGNFSQEEEQTILHLHSILGNKytllqpissirsgsflslcleyhkltrlilttRWSAIATHLD-GRTDNEIKNFWNTHL 145 89**************************************************************.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence |
MGKSLCCDEP GLKKGPWTPE EDQKLVQYIQ QHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGNF SQEEEQTILH LHSILGNKYT LLQPISSIRS GSFLSLCLEY HKLTRLILTT 120 RWSAIATHLD GRTDNEIKNF WNTHLKKKLI QMGIDPMTHQ PRTDLFSNLQ DLLQPQYQLL 180 DQHAATTLHG AAEAVAQLVK LQYLQQQYVL QSHLLNPSVG SYAPPPIKEN LPVLNSSHVV 240 LENPSSFSQP LHYGTLEPHQ DDPQVRFSTF AVPEIDEMGQ GSKFTPMVSS LCQAEKNPPE 300 IDEYCPWLLQ YSSNIPTPLG STLINNPGDA SCSTSSNGGI RSSTSSSYWP ELFLEETKTN 360 YD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 2e-81 | MYB family protein |