PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004082.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

SRS

Protein Properties

Length: 135aa MW: 14711.7 Da PI: 7.6394

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004082.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	71	3.7e-22	44	96	102	154
DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +slP++v+++avf+c rv+++++ge+e+aYq++v+i+GhvfkG+Lyd+ +++ Rmu_sc0004082.1_g000006.1 44 RQSLPDQVRVPAVFKCHRVTAISNGEAEIAYQATVKISGHVFKGLLYDRWVDK 96 456*********************************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 135 aa Download sequence
MGLVEWVTDV TILWFLLITS SSTHVRGHAG HGIVTLVQLD ANLRQSLPDQ VRVPAVFKCH 60 RVTAISNGEA EIAYQATVKI SGHVFKGLLY DRWVDKKNEY PCISHMHLGS GSNQRNGDSS 120 SPTVPPSDVC VASTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	2e-24	SRS family protein