PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004074.1_g000008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 25095.6 Da PI: 4.9223 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 4e-18 | 59 | 107 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a++ ++g Rmu_sc0004074.1_g000008.1 59 YRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFETPEMAARAHDVAALTIKG 107 9****998.**********843...6**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MEEEQSTTAT SSSGSTTSAQ CEAGKISKRV KKQQVVENGS EKRAKSDGSE EGSKQHPMYR 60 GVRMRQWGKW VSEIREPRKK SRIWLGTFET PEMAARAHDV AALTIKGRSA YLNFPELAKE 120 LPRPDSSSPK DIQAAAAKAA AISYPNCSSS HEAHEAEEAQ PAQDSSTSPI SDDHNDDTFY 180 DLPDLLLDVG QYHGDHEYYF PVVTWQLGGA DPIDTSLRME ESFLWD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16750.1 | 2e-49 | ERF family protein |