PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003892.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 354aa MW: 39007.9 Da PI: 7.1771

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003892.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.3	1.6e-33	193	250	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers edp++v++tYeg+Hnh+ Rmu_sc0003892.1_g000004.1 193 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCGVKKRVERSFEDPSTVITTYEGQHNHP 250 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MSDHHHEPKD LYYHDLFQYD DHGQLNGGMI MNNPKVSGSS SPAYNNLLQG FDVPSYMNTS 60 FTEYNSLATA FGLSSSPSDH EVFSSIDEGS HQKPVDNLGY LGAGGGHVSS DGEVHVTPNS 120 SVSSSSAEAG AEEDSGNKSK KDRQQPQTKG SSEEGGDVHS PKKSSKIVKK KGEKKQREPR 180 FAFMTKSEVD HLEDGYRWRK YGQKAVKNSP YPRSYYRCTT QKCGVKKRVE RSFEDPSTVI 240 TTYEGQHNHP IPATLRGSIN INAAHHHHAL FSPSSMYASA APTTSSSGPS FPQEYLFQMA 300 TPQIMMRNDG GGVGPGGIYS SRNVNFPQQY HQLPADQYGL LQDVVPSMFF KQEP

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MSDHHHEPKD LYYHDLFQYD DHGQLNGGMI MNNPKVSGSS SPAYNNLLQG FDVPSYMNTS  60
FTEYNSLATA FGLSSSPSDH EVFSSIDEGS HQKPVDNLGY LGAGGGHVSS DGEVHVTPNS  120
SVSSSSAEAG AEEDSGNKSK KDRQQPQTKG SSEEGGDVHS PKKSSKIVKK KGEKKQREPR  180
FAFMTKSEVD HLEDGYRWRK YGQKAVKNSP YPRSYYRCTT QKCGVKKRVE RSFEDPSTVI  240
TTYEGQHNHP IPATLRGSIN INAAHHHHAL FSPSSMYASA APTTSSSGPS FPQEYLFQMA  300
TPQIMMRNDG GGVGPGGIYS SRNVNFPQQY HQLPADQYGL LQDVVPSMFF KQEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29860.1	3e-54	WRKY family protein