PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003850.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 339aa MW: 39815.4 Da PI: 8.9391

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003850.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.5	1.2e-24	40	128	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 fYn+Y+ + GFs+r++++ k+k++ e+t+r fvC keg r++ k++ r++raetr gC+a+l +k+++ ++k+ vt++++e Rmu_sc0003850.1_g000002.1 40 FYNRYGGKEGFSIRRKSHAKNKKTSETTSRVFVCCKEGIRSKYKRD-YMIRKSRAETRPGCHAELYIKLNReNNKFFVTHFVEE 122 9***************************************9999.99*****************99******** PP FAR1 85 HnHela 90 HnH+l+ Rmu_sc0003850.1_g000002.1 123 HNHPLV 128 **96 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MDIALGATDV NVENFDFDLE LDWKPRKGME FDYEQAAYYF YNRYGGKEGF SIRRKSHAKN 60 KKTSETTSRV FVCCKEGIRS KYKRDYMIRK SRAETRPGCH AELYIKLNRE NNKFFVTHFV 120 EEHNHPLVVK EYSHKLPLQQ KVQDCQGIDI DLAHDSRIDV TSLYEFMGKQ AGGRDVVGYT 180 KQDMKNYLRS KRQRSLEYGE AGYIMKYFSD QTLENPSFYH AVQLDSEEQI TNLFWADAKM 240 IINYGQFGDV VNFDMTYKIN KFNRPLVVFV GFNHHRKTII FGVALIMYDE TVDSFIWLFE 300 TFFRAMSGKA PKTIFTNQDA AMAKALRHVM PDAYHRLCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-72	FAR1 family protein