PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003759.1_g000007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NF-YA | ||||||||
Protein Properties | Length: 346aa MW: 37598.1 Da PI: 9.1538 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 103.3 | 2.2e-32 | 171 | 227 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQyq+Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR+Rg+gGrF Rmu_sc0003759.1_g000007.1 171 QEPVYVNAKQYQGILRRRQARAKAELEKKL-IKVRKPYLHESRHQHAMRRARGTGGRF 227 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence |
MQPKSDTENR IPADRHTIPP STVSSEPWWR TVGYNPTSPA AAGINASNSS SFERPKSRSE 60 SSDDKSVSDD GSNDDDDNAT KKSQMTSPQS VGNKNQDLQL VSSTVPTVHD EGVAQPQQLE 120 LIGHSIACAS NPYQDPYYAG MMAAYGHQPL GYPPFVGVPH ARMPLPLEMA QEPVYVNAKQ 180 YQGILRRRQA RAKAELEKKL IKVRKPYLHE SRHQHAMRRA RGTGGRFARK TNGDTSKTTG 240 QEKASSSGPA HSSQSASSSG SEPLPSDSAE TWNSSTSQLE ARRPVHDAYA TNNYVNGSGC 300 YQTHGGLQAS LYRSYSGKRG DEGDCTGQER GSMSSNQGSQ RRLAIQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20910.1 | 2e-62 | NF-YA family protein |