PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003735.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family M-type_MADS
Protein Properties Length: 272aa    MW: 30921.3 Da    PI: 4.2544
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003735.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF29.31.1e-0929641550
                               HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
                     SRF-TF 15 kRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                               kR+ ++ K A+ L +LC+a+v+ +++++tg++  ++
  Rmu_sc0003735.1_g000004.1 29 KRKSTLKKSASQLEILCGAQVCCVLVGPTGNVEVWP 64
                               9*******************************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MVTKSQTTIS GENIKEIRSL RFLEKPIQKR KSTLKKSASQ LEILCGAQVC CVLVGPTGNV  60
EVWPENPADA VSIIAKYKQC KKKTKVCREV NRSKNVEQFE ENKGLAMGDD DIDQSMNTLE  120
NYEEDKGFDI DQFLNNTMEN LEDQNKGIDM GDDIDQFLMN NTRENVEPNN GFDTDHDFDQ  180
FLNEFFGDTN DLKVGFPECS TSNAHMPTPG FEDHQIDNVC GVWPWETLWS TPQYSGFDGA  240
YYLPKFENDG FLCQEQPKLM GSNQTFRDIG SN