PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003714.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 385aa    MW: 42574.4 Da    PI: 4.607
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003714.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-1879129155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta +Aa a+++a+k+++g
  Rmu_sc0003714.1_g000001.1  79 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTAVDAALAYDEAAKAMYG 129
                                56*****999.**********8...3.35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MGAYDQGSNG FSQPLGSSKK RGRRSNKDGA SVLETLSRWK EYNNLLESGI YDDKARKIQA  60
KGSKKGCMKG KGGPENQRCN YRGVRQRTWG KWVAEIREPN RGSRLWLGTF PTAVDAALAY  120
DEAAKAMYGA TARLNHPNVY SHNSYTSSWN DSSHETSSVT TPSGCSTVAT QGCCESTMIS  180
NQSDHSEICA EEESFIVKTE DGEDESTSHN AFTQPRTSNA TADVEVKSEV PMHHFHTDQP  240
GVQEQARDWI STDGFDMDYY LKQFSIDELF DVDELVGPMD GKPIPAPRLQ QDLSSDVGRP  300
QFTDMVPVDN NATLSDSSYQ LQYPDDKPPG GNVQHMDVEP SVADYGFDLL NRQMQENNVG  360
VDNHGYFNVD DFDFNFTGGC GGNAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.14e-42ERF family protein