PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003684.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | G2-like | ||||||||
Protein Properties | Length: 257aa MW: 28682 Da PI: 9.4054 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.8 | 1.9e-31 | 84 | 138 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rW+++LHe+Fve+v++LGG++kAtPk+il++m+++gLt+ hvkSHLQkYR+ Rmu_sc0003684.1_g000001.1 84 KTRIRWNQDLHEKFVECVNRLGGADKATPKAILKMMGLEGLTIFHVKSHLQKYRI 138 68****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 50.4 | 5e-16 | 88 | 137 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rW ++++e++v++v++lGg t+k+I ++mg +g+t ++ks++qky+ Rmu_sc0003684.1_g000001.1 88 RWNQDLHEKFVECVNRLGGAdkaTPKAILKMMGlEGLTIFHVKSHLQKYR 137 9*****************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
SQSYKSSEKS DQIPSNHLPG SKLFLHQDST SGSVRRPFSL AFKENQEQVS FFSQQAKQSP 60 RTSSGTVSAA SGDSSSTSPS LSSKTRIRWN QDLHEKFVEC VNRLGGADKA TPKAILKMMG 120 LEGLTIFHVK SHLQKYRIAK YLPDSAEGKS EKRANVNVEP QLDVKTGLQI KEALQLQLDV 180 QRQLHEQLEI QRNLQLRIEE QGERLKKMFD LQQKTSDSTL KTPNVDFTCH ENGPSDNEIQ 240 VSSPEGSGNS HFPSKIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 5e-71 | G2-like family protein |