PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003594.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 249aa    MW: 27042.9 Da    PI: 5.1346
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003594.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.8e-1960110155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  Rmu_sc0003594.1_g000007.1  60 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 110
                                68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MSSTTETQLG SETDSSSSSS SPPSSPASSG PLNPNKPSSP ESDTKNNKKI KRDRDSSKHP  60
VYRGVRMRNW GKWVSEIREP RKKSRIWLGT FPTPEMAARA HDVAALSIKG NSAILNFPEL  120
SNSLPRPASL APRDVQAAAS KAAQMHQFDS KPSMSTTSSS SSLCSLVSAI DNLSTESEEL  180
SEIVQLPSLG TSYESYELRN EFLLVDSAED EWVYPPPWLQ QMGDCGVYLC GGLGSSSNST  240
GFEGLLWDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.18e-73ERF family protein