PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003565.1_g000022.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 782aa MW: 89996.1 Da PI: 6.6743

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003565.1_g000022.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	96.2	3.7e-30	74	168	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtk 80 fYn+YA+++GFs+r+s s++s+r+g i++r fvC keg+r ++++k + + +r+raetr+gCka+l+vk +++g w+v+ Rmu_sc0003565.1_g000022.1 74 FYNSYARRTGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRMDKHEKrgpecDGRVKRPRAETRVGCKAMLVVKIQDSGGWVVSC 157 9***************************************99999999999999************************ PP FAR1 81 leleHnHelap 91 +++eHnHel+p Rmu_sc0003565.1_g000022.1 158 FVKEHNHELVP 168 *******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 782 aa Download sequence
MEFEPLRLGN EVVEFDLMGL GDIDHPVVDI DIFDDSLAVV GSNPIALPYI IEGETNLEPY 60 EGMEFESEEA AKAFYNSYAR RTGFSTRVSM SRRSRRDGAI IQRSFVCAKE GFRMDKHEKR 120 GPECDGRVKR PRAETRVGCK AMLVVKIQDS GGWVVSCFVK EHNHELVPPD QVHCLRSHRH 180 VSGSAKSLVD TLQGAGIGPS GIMSALIKEY GDISKVGFTE RDCRNYMRSS RQRTLGGDTR 240 VLLDYLKNRQ ANDPAFFYSV QGDQDQCMSN IFWADPKARS DYTYFGDTVT FDTIYRSNRY 300 RLPFAPFTGV NHHGQPVLFG CALLVNESEA SFLWLFKTWL MAMSGRPPVS ITTDHDRVIR 360 MAITQVFPET RHRFCKWHIF KECQEKLSHV LSEHSNFEAE LHKCVNLTES IEEFESSWLS 420 LIEKYDLRDH EWLHGIYADR RQWVPIYLRD TFFAEMSITQ RSNTMNSYFD GYVNASTSLQ 480 LFVKQYEKAL ESRYEKEVKA DYDTINTAPL LKTPSPMEKQ AGELYTRKLF MKFQEELVET 540 LTFLATKVED EEAGSIYQVA KFGESHRAYF VRYDVHEMKA FCSCQMFEFS GLLCGHILTV 600 FRVTNVLTLP SHYILKRWTR NAKSDVILEE RASNLLNRSQ ESLTERFSNL RHAALKYVDG 660 GVETVEIYNV AIAALQEAAK KVALENKSGG RLVSVNKTGR DDDLHWGCQA NTFGDHIWGL 720 ETLSPDDQDK KIQKLSRQLE RARRKCEVYR THLFSVLKDI EEQKLQLSVK VQNIRIEMEE 780 CN

Sequence ? help Back to Top

Protein Sequence Length: 782 aa Download sequence

MEFEPLRLGN EVVEFDLMGL GDIDHPVVDI DIFDDSLAVV GSNPIALPYI IEGETNLEPY  60
EGMEFESEEA AKAFYNSYAR RTGFSTRVSM SRRSRRDGAI IQRSFVCAKE GFRMDKHEKR  120
GPECDGRVKR PRAETRVGCK AMLVVKIQDS GGWVVSCFVK EHNHELVPPD QVHCLRSHRH  180
VSGSAKSLVD TLQGAGIGPS GIMSALIKEY GDISKVGFTE RDCRNYMRSS RQRTLGGDTR  240
VLLDYLKNRQ ANDPAFFYSV QGDQDQCMSN IFWADPKARS DYTYFGDTVT FDTIYRSNRY  300
RLPFAPFTGV NHHGQPVLFG CALLVNESEA SFLWLFKTWL MAMSGRPPVS ITTDHDRVIR  360
MAITQVFPET RHRFCKWHIF KECQEKLSHV LSEHSNFEAE LHKCVNLTES IEEFESSWLS  420
LIEKYDLRDH EWLHGIYADR RQWVPIYLRD TFFAEMSITQ RSNTMNSYFD GYVNASTSLQ  480
LFVKQYEKAL ESRYEKEVKA DYDTINTAPL LKTPSPMEKQ AGELYTRKLF MKFQEELVET  540
LTFLATKVED EEAGSIYQVA KFGESHRAYF VRYDVHEMKA FCSCQMFEFS GLLCGHILTV  600
FRVTNVLTLP SHYILKRWTR NAKSDVILEE RASNLLNRSQ ESLTERFSNL RHAALKYVDG  660
GVETVEIYNV AIAALQEAAK KVALENKSGG RLVSVNKTGR DDDLHWGCQA NTFGDHIWGL  720
ETLSPDDQDK KIQKLSRQLE RARRKCEVYR THLFSVLKDI EEQKLQLSVK VQNIRIEMEE  780
CN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein