PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003511.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 407aa    MW: 47099.1 Da    PI: 5.88
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003511.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR131.17.8e-1056111155
                       FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtr 55 
                                +fYn+YAk +GF+vr ++++ s + +g++t+ ++vCs +g+  ++  ++ ++rr++
  Rmu_sc0003511.1_g000007.1  56 SFYNAYAKAMGFDVRSDYKRLSiRITGRVTSLRLVCSAQGFIMKDLYNELDSRRRE 111
                                5******************999999****************999888744444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    
MDGSYEPSIS DIGLVSQSSI NGSDCNEMQY KGVRYDKLST EDLKGQEFKT VEEADSFYNA  60
YAKAMGFDVR SDYKRLSIRI TGRVTSLRLV CSAQGFIMKD LYNELDSRRR EILLEGDAEA  120
ALAYMRGKVA TYSHFYCKFS IDEDNRLANM FWRDSNSLVD YTCFGDVLVF DSTYKTNPYE  180
KPLVLFVGSN NHLSTTVFGF ALLMDETIET YTWVLETFIS SMNNKRPVAV LTDGDEAMRR  240
AIEVVLPGCP HRLCTWHIAK NARRHLRKNS VFSEFRRCMW DEVTPDGFEK RWNAMVNTHG  300
LHNKDWVKMM YEKRQIWAEA FISGHFFARM RSTQRCEGTM FTDSVFEHVR NEIDGVGDLI  360
TSRTMVFGSS RVYFTSSYND NKQEIEYTTV YYPDENNPRM ECSCTAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.12e-46FAR1 family protein