PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003404.1_g000004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 228aa MW: 25348.2 Da PI: 6.5212 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.9 | 2.6e-09 | 23 | 69 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 rWT Ed+l+ +a ++ + +W++Ia++++ g++++++ +++ ++ Rmu_sc0003404.1_g000004.1 23 RWTRPEDKLFEQALVRFSEDlpdRWERIAEMVP-GKSAEEVLEHYETL 69 8*****************99*************.**********9875 PP | |||||||
2 | Myb_DNA-binding | 43.5 | 7.5e-14 | 124 | 169 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+ E++l++ + kq+G+g+W++I+r + +Rt+ q+ s+ qky Rmu_sc0003404.1_g000004.1 124 KPWTEIEHKLFLVGLKQFGKGDWRSISRNVVVTRTPTQVASHAQKY 169 58*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MFQEAAPPCW PAGVSHSTSS SARWTRPEDK LFEQALVRFS EDLPDRWERI AEMVPGKSAE 60 EVLEHYETLV HDVVEIDSGR VELPSYADDS VVGWDTSSQI SFDGCKNSNN NGGGGEAAER 120 KKGKPWTEIE HKLFLVGLKQ FGKGDWRSIS RNVVVTRTPT QVASHAQKYF LRQSSGKKER 180 KRSSIHDITS VETNSVPAPA ERKWIPPPPP PPGDQGGSFA FPDFGFPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 1e-66 | MYB family protein |