PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003404.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB
Protein Properties Length: 228aa    MW: 25348.2 Da    PI: 6.5212
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003404.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.6e-092369347
                               SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                               rWT  Ed+l+ +a  ++  +   +W++Ia++++ g++++++ +++ ++
  Rmu_sc0003404.1_g000004.1 23 RWTRPEDKLFEQALVRFSEDlpdRWERIAEMVP-GKSAEEVLEHYETL 69
                               8*****************99*************.**********9875 PP
2Myb_DNA-binding43.57.5e-14124169247
                                SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                ++WT+ E++l++ + kq+G+g+W++I+r +  +Rt+ q+ s+ qky
  Rmu_sc0003404.1_g000004.1 124 KPWTEIEHKLFLVGLKQFGKGDWRSISRNVVVTRTPTQVASHAQKY 169
                                58*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MFQEAAPPCW PAGVSHSTSS SARWTRPEDK LFEQALVRFS EDLPDRWERI AEMVPGKSAE  60
EVLEHYETLV HDVVEIDSGR VELPSYADDS VVGWDTSSQI SFDGCKNSNN NGGGGEAAER  120
KKGKPWTEIE HKLFLVGLKQ FGKGDWRSIS RNVVVTRTPT QVASHAQKYF LRQSSGKKER  180
KRSSIHDITS VETNSVPAPA ERKWIPPPPP PPGDQGGSFA FPDFGFPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.11e-66MYB family protein