PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003363.1_g000069.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 321aa    MW: 34808 Da    PI: 4.9143
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003363.1_g000069.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.9e-1885134255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                 ++GVr ++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g
  Rmu_sc0003363.1_g000069.1  85 TFRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAARAIKG 134
                                59****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MAKKINIESD AQANLHTSSS SSSSSSSTLT THDSLIDKST ENDQNSDKVS SSKGQELNNG  60
SNEPNTKKRQ RSSSTDHGDG GRHPTFRGVR MRSWGKWVSE IREPRKKSRI WLGTYPTAEM  120
AARAHDVAAR AIKGASAYLN FPELAQTLPQ PASASPKDIQ AAAAKAASAF EEYSLFFIFH  180
LAARAIKGAS AYLNFPELAQ TLPQPASASP KDIQAAAAKA ASAFEEVKKC EAETEEEEEE  240
EATLPSKDEQ TTTTANTSIS TACSSSSTSN DYDDKLFDLP DLFMDGTNGS DQFCFSSSSS  300
SWHLCAADTG FRLEEPFLWE Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.17e-30ERF family protein