PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003314.1_g000010.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 366aa MW: 40404.9 Da PI: 6.1464

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003314.1_g000010.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	57.5	3e-18	223	285	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +k+lkre+rkq NRe+ArrsR RK+ae eeL + +++L++e ++Lk+el++lk ++k++ e+ Rmu_sc0003314.1_g000010.1 223 DKQLKREKRKQANRESARRSRMRKQAEYEELVKSCDSLSTEQMDLKSELDQLKVDAEKMRLEN 285 689*******************************************************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MLYYLIGETD ETLIGFPISL AEGSHIDPPL HQSRHFSFQP SPTLSPVDIS PLNPTPSPPL 60 LRRRSPPQEN LPLLSPEISK PSFFEGNMDQ DVTKKFKGLD GHAVPIAYVS SKGNSGHPVL 120 EASKSFEENK DGLTGGADGN TRADHHRQGK NGSYSVPTSD NDVKDHPQVH PNNEGEINRN 180 FATSNDLVRV PIRSPYEKIA TSTPFFSPSA GERLPFDAMV LDDKQLKREK RKQANRESAR 240 RSRMRKQAEY EELVKSCDSL STEQMDLKSE LDQLKVDAEK MRLENAALRE QLKNAQVMQE 300 GGNASPKTEG VFTLPNDAKN ILSNLGSVSS NAPPDCETHE TSVSETVTRL HQLLESSSRT 360 DAVAAR

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MLYYLIGETD ETLIGFPISL AEGSHIDPPL HQSRHFSFQP SPTLSPVDIS PLNPTPSPPL  60
LRRRSPPQEN LPLLSPEISK PSFFEGNMDQ DVTKKFKGLD GHAVPIAYVS SKGNSGHPVL  120
EASKSFEENK DGLTGGADGN TRADHHRQGK NGSYSVPTSD NDVKDHPQVH PNNEGEINRN  180
FATSNDLVRV PIRSPYEKIA TSTPFFSPSA GERLPFDAMV LDDKQLKREK RKQANRESAR  240
RSRMRKQAEY EELVKSCDSL STEQMDLKSE LDQLKVDAEK MRLENAALRE QLKNAQVMQE  300
GGNASPKTEG VFTLPNDAKN ILSNLGSVSS NAPPDCETHE TSVSETVTRL HQLLESSSRT  360
DAVAAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	247	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	7e-28	bZIP family protein