PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003275.1_g000010.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 467aa MW: 54317.4 Da PI: 7.6806

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003275.1_g000010.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.7	2.6e-25	37	126	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +fYn+Y+ + GFs+r++++ k+kr++e t+r fvC keg r+++k++ r++raetrtgC akl +k+++ ++k+ vt++++ Rmu_sc0003275.1_g000010.1 37 DFYNRYGGKKGFSIRRETHGKNKRTKELTSRLFVCCKEGIRSKDKRD-YMIRKPRAETRTGCGAKLCIKLNRrNNKFFVTHFVE 119 6*****************************************999.99*****************99******* PP FAR1 84 eHnHela 90 HnH+l+ Rmu_sc0003275.1_g000010.1 120 GHNHPLV 126 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MDNSLGAADI DIENSDLELD WKPRKGMEFD SEQAAYDFYN RYGGKKGFSI RRETHGKNKR 60 TKELTSRLFV CCKEGIRSKD KRDYMIRKPR AETRTGCGAK LCIKLNRRNN KFFVTHFVEG 120 HNHPLVGKEC SHMLPSQRKV QDSQGIDIDL AHDSGIGVTS LYELMGKKAG GRDAVGYTKQ 180 DVKNYLRSRR QRSLEYGEAG YIMKYFSDQT LENPSFYHAM QLDSEEQITN LFWADAKMII 240 DYGQFGDVVS FDTTYKVNKS NRPLAVFVGF NHHRETIIFG VALMYDETAD SFIWLFETFL 300 RAMSGKAPKT IFTDQDAAMA KALRHVMPDV YHRLCKWHMM QNAIKHGHSF LTEEGGITSV 360 LSRFMENIEE EDEFISAWDA MLDKYGARDN TWLSSIYDLR EKWGFSYVKR AWSAGIRSTQ 420 LSESFNSALK KYLDSDHNLS EFFIHFERMV ADKRYKELEA EYDMWFR

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MDNSLGAADI DIENSDLELD WKPRKGMEFD SEQAAYDFYN RYGGKKGFSI RRETHGKNKR  60
TKELTSRLFV CCKEGIRSKD KRDYMIRKPR AETRTGCGAK LCIKLNRRNN KFFVTHFVEG  120
HNHPLVGKEC SHMLPSQRKV QDSQGIDIDL AHDSGIGVTS LYELMGKKAG GRDAVGYTKQ  180
DVKNYLRSRR QRSLEYGEAG YIMKYFSDQT LENPSFYHAM QLDSEEQITN LFWADAKMII  240
DYGQFGDVVS FDTTYKVNKS NRPLAVFVGF NHHRETIIFG VALMYDETAD SFIWLFETFL  300
RAMSGKAPKT IFTDQDAAMA KALRHVMPDV YHRLCKWHMM QNAIKHGHSF LTEEGGITSV  360
LSRFMENIEE EDEFISAWDA MLDKYGARDN TWLSSIYDLR EKWGFSYVKR AWSAGIRSTQ  420
LSESFNSALK KYLDSDHNLS EFFIHFERMV ADKRYKELEA EYDMWFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-106	FAR1 family protein