PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003264.1_g000024.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 98aa    MW: 11080.1 Da    PI: 4.4538
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003264.1_g000024.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.21.9e-115998241
                       FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkr 41
                               fYn+YA+++GFsvrk+ ++ks +n+ i +r+++Cs +gkr
  Rmu_sc0003264.1_g000024.1 59 FYNDYAHTIGFSVRKDVMQKSAKNEVISERQWCCSGKGKR 98
                               9***********************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MEEHEQDDAN NNVLGEEDGN CNTEQGGGLH QFNGLSYIKL QNEDMIGKSF STLEEADIFY  60
NDYAHTIGFS VRKDVMQKSA KNEVISERQW CCSGKGKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.16e-08FAR1 family protein