PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003226.1_g000028.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 197aa MW: 22791.1 Da PI: 9.7236 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 73.7 | 4.1e-23 | 34 | 118 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 fYn+YAke+GFs+r ++s ++k+n + +++++vC+k+g ++ + +k r+r ++gCka++ v ++k +g++ ++ +++ Rmu_sc0003226.1_g000028.1 34 FYNRYAKEAGFSIRSHSSATNKDNSQLMRKEYVCYKQGDSKVQGEK-----RKRGLPKMGCKARIAVVRKKeSGRYAISVFVEG 112 ***************************************9998777.....999***********9888777************ PP FAR1 85 HnHela 90 HnH l+ Rmu_sc0003226.1_g000028.1 113 HNHLLT 118 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MESEDDQVYI PQVKAELMPK LYQEFETIDD VVAFYNRYAK EAGFSIRSHS SATNKDNSQL 60 MRKEYVCYKQ GDSKVQGEKR KRGLPKMGCK ARIAVVRKKE SGRYAISVFV EGHNHLLTSP 120 PRVHLLRSHR RVSEVNIVLS QQLSLVNVGK HKQFEFFGVQ ACGIQNIGFI QRDLYNYGRT 180 CREEKKGHDG DLLYMHF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-24 | FAR1 family protein |