PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003187.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 278aa    MW: 31935.9 Da    PI: 4.61
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003187.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.51.8e-3057115259
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers++d +v++itY+++Hnh+
  Rmu_sc0003187.1_g000008.1  57 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSKTDASVLIITYTSSHNHP 115
                                699***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MDETLSSPEQ DSEVSKELMI RPETQASKRR KVAHQKTVVT VKIGPNVGKL KNEGPPSDFW  60
SWRKYGQKPI KGSPYPRGYY RCSTSKGCSA KKQVERSKTD ASVLIITYTS SHNHPGPDVT  120
STTKNQSPPP KEAQMQPNSE DDDHDHDHTA EVPKEDEPEQ EQEPDQDEEQ EQERKVDEQQ  180
EQDHFHYIQS PIRSSQDIVI YQEEDPFSSG NHLEKTLLDE HPHPLCYSQL LSFSSTPKSE  240
EEEDFYDELE ELLPTSSYFP SFMRSNLSQL ERIPFVPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.14e-35WRKY family protein