PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003179.1_g000016.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 271aa MW: 31980.5 Da PI: 10.2585

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003179.1_g000016.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.5	6.7e-16	51	159	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....................tekerrtraetrtgCka 64 kfY+ Y++ + Fs+rk+k+ +k+++ +++r++vCsk g++ + +k+ +++ r + +rt+C a Rmu_sc0003179.1_g000016.1 51 KFYKYYSHVASFSTRKAKKDMHKTKKIVYRRQWVCSKAGRHVSVQKTkevggcgmkeapngdknkvsRKRLLRGTRISRTDCPA 134 6**************************************99999899********9876544444558899***** PP FAR1 65 klkvkkek.dgkwevtkleleHnHe 88 +++v ++ ++ ++v+k++++HnH+ Rmu_sc0003179.1_g000016.1 135 QFMVMWSNhQDLFYVSKFVTQHNHD 159 999988879*************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MEMNGCNQFK KVVLDLGVEF GNVELNGRNF KDITYEDVKH LWFRTIDEAE KFYKYYSHVA 60 SFSTRKAKKD MHKTKKIVYR RQWVCSKAGR HVSVQKTKEV GGCGMKEAPN GDKNKVSRKR 120 LLRGTRISRT DCPAQFMVMW SNHQDLFYVS KFVTQHNHDP AIAPEVHFLR SHRNVERHDI 180 AQVESLLQAQ VSISRAYEFL AQQSGGYHNM RFTEKDIYNK LRPKNMKYDA KGDAETAVRR 240 MKAKGSTEKE FWFEYTIDKD RRLATMFWRD Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-16	FAR1 family protein