PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003147.1_g000008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 216aa MW: 25412.9 Da PI: 10.4645 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.9 | 8.6e-17 | 5 | 52 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++++++G g+W++++ g++R++k+c+ rw++yl Rmu_sc0003147.1_g000008.1 5 KGSWTKEEDHLLRNYIEKHGQGRWHKVPLQAGLNRCRKSCRMRWLNYL 52 799*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 34.4 | 5.2e-11 | 58 | 99 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +g + ++E +l +++ k+lG++ W++Ia +++ gRt +++k++w Rmu_sc0003147.1_g000008.1 58 KGDFAEDEVDLMIRLRKLLGNR-WSLIAGRLP-GRTSNDVKNYW 99 57788999**************.*********.*********** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MEVRKGSWTK EEDHLLRNYI EKHGQGRWHK VPLQAGLNRC RKSCRMRWLN YLKPNIKKGD 60 FAEDEVDLMI RLRKLLGNRW SLIAGRLPGR TSNDVKNYWS ARGRRNINFS FTKNYKHPEI 120 TKTTIIRPRP RTFTKSLHYL SAKATTSKPI NLENSSLSTS PPMQNGNEEW KTLLEEDVLT 180 NFWNEDTVSM SSMGVNSTQQ GFEMDLWHFL QEEARQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 8e-53 | MYB family protein |