PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003116.1_g000010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 20906 Da PI: 7.4105 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.6 | 1.3e-17 | 35 | 84 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++GVr++ +g+WvAeIr+p+ r +r +lg+f t eAa a++ a++kl+g Rmu_sc0003116.1_g000010.1 35 TFRGVRQRT-WGKWVAEIREPK----RgARLWLGTFNTSTEAALAYDDAARKLYG 84 69****999.**********83....46************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MDNDQERKVT RKANMGRSRK GSMKGKGGPE NATCTFRGVR QRTWGKWVAE IREPKRGARL 60 WLGTFNTSTE AALAYDDAAR KLYGSSAKLN LPDHSSSSSS SSSTSPSSKT SSADKGCGEH 120 KHEAYSGDMH GGWSSNNREN DCLWESNPVL SADWSGVCGE REFLELNDIG IMMGGNGFVS 180 CEASLEEAPW SL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18450.1 | 1e-34 | ERF family protein |