PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003063.1_g000032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 196aa MW: 21625 Da PI: 4.7573 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1e-18 | 18 | 67 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr +k +g+Wv+eIr+p gk++r++lg+f t+e+Aa+a++ a++ ++g Rmu_sc0003063.1_g000032.1 18 AYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAAAAYDVAALHFRG 67 69****999.**********8...557***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MGEPNSSSST VYGAATSAYR GVRKRKWGKW VSEIREPGKK TRIWLGSFET PEMAAAAYDV 60 AALHFRGREA RLNFPELVNY LPRPASSSPD DIRMAAHEAA LRLRSNDGDT TNSLGAAGHC 120 DVGSSSSSGV APVTVRLSPS QIQAINESPL DSPKMWMQMS EALMFEESMM FSNDFDDEGM 180 NSNQWENIQQ DSLWDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 2e-65 | ERF family protein |