PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003044.1_g000040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 186aa MW: 21225.1 Da PI: 9.3932 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 79.4 | 6.4e-25 | 39 | 126 | 3 | 90 |
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleH 85 Yn+Y+ + GFs+r++++ k+kr++e t+r fvC keg r+++k++ r++raetrtgC akl +k+++ ++k+ vt++++ H Rmu_sc0003044.1_g000040.1 39 YNRYGGKKGFSIRRETHGKNKRTKELTSRLFVCCKEGIRSKDKRD-YMIRKPRAETRTGCGAKLCIKLNRrNNKFFVTHFVEGH 121 ******************************************999.99*********************99************* PP FAR1 86 nHela 90 nH+l+ Rmu_sc0003044.1_g000040.1 122 NHPLV 126 ***96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MDNSLGATDI DIENSDLELD WKPRKGMEFD SEQAAYDSYN RYGGKKGFSI RRETHGKNKR 60 TKELTSRLFV CCKEGIRSKD KRDYMIRKPR AETRTGCGAK LCIKLNRRNN KFFVTHFVEG 120 HNHPLVGKEC SHMLPSQRKV QDSQGIDIDL AHDFGIGVTS LYELMGKQAG GRDDVGYTKQ 180 EIVMSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-25 | FAR1 family protein |