PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003005.1_g000026.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 436aa    MW: 47884.7 Da    PI: 6.7045
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003005.1_g000026.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.31e-30173231259
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                +Dg++WrKYGqK+ kg+++pr+YYrCt+  gCpv+k+v+r aed++++++tYeg+Hnh+
  Rmu_sc0003005.1_g000026.1 173 SDGCQWRKYGQKMAKGNPCPRAYYRCTMVaGCPVRKQVQRLAEDKTILITTYEGNHNHP 231
                                7***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    
MDEQLCDLKH LHSDQSFLGL SSSSDHRLVE PPIKEETLFK EIKEVDFLSN NRLPNQPPPG  60
HAELTTLQLQ VELQREHEEN QKLRTILDQI TKNYNGLQAQ LRMIRLQEQL QTCAEDSNLD  120
PKLSFLHDDQ SPKSSSHHDH DQEQVPAVTD HDQVPLRRAR VSVRARSEAP MISDGCQWRK  180
YGQKMAKGNP CPRAYYRCTM VAGCPVRKQV QRLAEDKTIL ITTYEGNHNH PLPAAAISMA  240
NTTSAAAAML ISGSTTSKEA HHHLTHPTGL FSSLQPLYGS SMATFSTSAP FPSITLDMTR  300
TPNPNPNPNP MQFMDSSATF PNPLQGYSHP LIGHPMCLNF PQHNHAALTP AAMQLADRPH  360
GSMVETITSA ITSDPKFTTA LAAALSSRMN NVENINAGLQ GSTNDIGSLN SNGSEVCAAF  420
SGSPQLPQSC TTFSTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01720.19e-57WRKY family protein