PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002985.1_g000008.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 337aa MW: 38753.9 Da PI: 7.5459

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002985.1_g000008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.6	1e-23	40	128	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 f n+Y+ + GFs+r++++ k+k++geit+r fvC keg r+++k++ r++raetrtgC+a+l +k+++ ++k+ t +++e Rmu_sc0002985.1_g000008.1 40 FCNRYGGKEGFSIRRESHAKNKKTGEITSRVFVCCKEGIRSKDKRD-YMIRKSRAETRTGCHAELCIKLNReNNKFFATYFVKE 122 889**************************************999.99*****************99******** PP FAR1 85 HnHela 90 HnH+l+ Rmu_sc0002985.1_g000008.1 123 HNHPLV 128 **96 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MDNALGATDV NVENFDFDLE LDWKPRKGME FDSEEAAYDF CNRYGGKEGF SIRRESHAKN 60 KKTGEITSRV FVCCKEGIRS KDKRDYMIRK SRAETRTGCH AELCIKLNRE NNKFFATYFV 120 KEHNHPLVVK ECSHMLPSQR KVQDYQGIDI DLAHDSGIGV TSLYELMGKQ AGGRDVVGYT 180 KQDVKNYLRS KRQRSLEYGK AGYIMKYFSD QTLENPSFYH AMQLDSKEQI TNLFWADAKM 240 IIDYGQFGDV VSFDTTYKIN KSNRPLAVFV GFNHHRETII FGVALMYDET ADSFIWLFET 300 FFRAMSGKAP KTIFTDQDAA MAKALRHVMP DEGLSVC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-76	FAR1 family protein