PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002893.1_g000015.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GeBP
Protein Properties Length: 262aa    MW: 30528 Da    PI: 5.9631
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002893.1_g000015.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57331.54.8e-1084159497
                     DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqk 87 
                                 r+w ee ei+lL+Gli+   k g        +f   + ks+  k sk+q+ +K+rrLK+K +k ++        +f+++h++ 
  Rmu_sc0002893.1_g000015.1  84 VRVWEEEEEITLLKGLISH--KSG--------NFNIEITKSLPNK-SKTQIKDKVRRLKEKCQKWKAG-------KFASPHEKR 149
                                699**************98..445........6788899999866.89*************9887777.......9******** PP

                     DUF573  88 ifelskkiWg 97 
                                  +lskkiW+
  Rmu_sc0002893.1_g000015.1 150 LHNLSKKIWE 159
                                *********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MATSQQYRYF SPPTALQFCH SDSDDDDIDT KEDEQDNNSP SLVGSDMEYQ CESDTESESA  60
DCSERKFRYS STKANQKMKS SVRVRVWEEE EEITLLKGLI SHKSGNFNIE ITKSLPNKSK  120
TQIKDKVRRL KEKCQKWKAG KFASPHEKRL HNLSKKIWEV DLTTRGEHEK KSINADAVGD  180
DKSKTTSDME DLVHVNDDVI IKAFDEYLLR RSLEINEEEE KERSELLDKW RKVAYNKARH  240
KLAIAEFTLE LQQYKLDGYN KC