PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002888.1_g000020.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB

Protein Properties

Length: 282aa MW: 32024.9 Da PI: 4.9456

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002888.1_g000020.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.4	1.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ l+d +k +G W++I++ g++R++k+c++rw++yl Rmu_sc0002888.1_g000020.1 14 KGPWTAEEDKMLADHIKAHGEQKWSSIPKQTGLKRCGKSCRLRWLNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.1	7.2e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eE++l+++++k+lG++ W++Ia +++ gRt++++k++w+ + Rmu_sc0002888.1_g000020.1 67 RGNITQEEEDLIIRLHKLLGNR-WSLIAGRIP-GRTDNEIKNYWNGH 111 7999****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MGRRPCCTKE GVNKGPWTAE EDKMLADHIK AHGEQKWSSI PKQTGLKRCG KSCRLRWLNY 60 LRPNIKRGNI TQEEEDLIIR LHKLLGNRWS LIAGRIPGRT DNEIKNYWNG HLCKKSQLEK 120 SKVAAKNMRP SDEVKVEEDH RHDSKVESES SEGSLFSHSS TTATTTEEDS SDILMGFYTR 180 EITLSEFLDT DFTKFSSMIS TDKVLMVQGE GEVQIQKQPQ VSSSQAEAEA NDEAPMNVII 240 SPEMMDNLIV WEDQTDSDFG FQLSAAFTDS VADEERILDF MN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34990.1	1e-60	MYB family protein