PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002831.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 406aa    MW: 45780.1 Da    PI: 9.2525
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002831.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR135.23.9e-113296266
                       FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkakl 66
                               +Y+ YA+ +GF  r ++ ++    g+it+r++vC+kegkre +  + +++ ++ ++etr++C a  
  Rmu_sc0002831.1_g000006.1 32 WYRMYATALGFIARLQRVTRG-IGGRITRRRLVCNKEGKREAKWLQkEDRVHNAKQETRCNCLAAC 96
                               7**************999987.9999***************9987723444556667777776654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MGKSRVGKSF AELTADDVEG REFTTLDDAE NWYRMYATAL GFIARLQRVT RGIGGRITRR  60
RLVCNKEGKR EAKWLQKEDR VHNAKQETRC NCLAACFSTS RADDYMVKSN GRFEFVGDTE  120
KDIFNKIEAE PRAKLFNQGE ETAPVVEVSD ITLTYYVSLS PHVKAVSADT ASTLLQQIAG  180
LTSIATEQSL KARDEILRLK RDSVRVPSQT GDENTSWHSR QKEAEAAVLK RELAECQREL  240
ELVKSADKYR YRTIEEVGGN SKKQITEDNY NRGQSPEGGA DIQLLCSLGG CSRDVKAFKV  300
HEDNQGSNLV AIKLVFCLEF QLDLTLQYPK YIISKFKNSS RTKLQFKFKY KVSKFKYEVH  360
IQIIQILIKL LEVYPFVRLH LDLGAVGATG AAGSGSTGAV NWSCRR