PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002774.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 324aa MW: 36254.2 Da PI: 6.9528 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.3 | 5.8e-16 | 113 | 161 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 s ++GVr++k g+W+AeIrdp + r +lg++ taeeA +a++ +r k+ Rmu_sc0002774.1_g000001.1 113 SPFRGVRQRK-YGKWAAEIRDPI----KgGRLWLGTYATAEEASQAYETMRCKF 161 679******9.7*********83....358********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MSRPSLNQRK HKSKQSSKRR EFHAHNEDSK VLTRKVRIMF NDPDATDSSS SSEDETMETA 60 QYEKKKSLKK SKRFVQEVIH SFFMHSGRAV GCEAPPETRT TRTSSGRKRF SSSPFRGVRQ 120 RKYGKWAAEI RDPIKGGRLW LGTYATAEEA SQAYETMRCK FDEILRATTT SISDKNNKDD 180 KSNSDHEHLF LLRKATPITA SNSGGNGLLS HKGSPVAVLD LGKNADSDKE NIGTNNVGQL 240 RIPLDLSFLD EALQSLPTDQ QQQDVFNFVP DNEELDKLAS SIASSSLEEL GKYFDGMYCS 300 IDDIKIGGVD DDNPTNLPDC DDFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 3e-16 | ERF family protein |