PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002755.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 227aa MW: 25372.8 Da PI: 10.6025 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 32.8 | 2.2e-10 | 29 | 89 | 1 | 59 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetr 59 +fYn+Y k +GF+vr ++++ s + g++t+ ++vCs +gkr+ee + +++ r++++etr Rmu_sc0002755.1_g000002.1 29 SFYNAYEKAMGFDVRSDYKRLSiRIIGRVTSLRLVCSAQGKRREEYMSnKKRVRKPKKETR 89 5******************9998999******************99882333344555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MQYKGVRYDK LSTEDLKGQE FKTVEEAESF YNAYEKAMGF DVRSDYKRLS IRIIGRVTSL 60 RLVCSAQGKR REEYMSNKKR VRKPKKETRF SLSVLALPRR RCDAAGRVLM VMVLLALRLA 120 IFRLASAGRG DGVFRGVSGG GLKVGIYRFD PSDQVWLFWC LLCGGGIAVV VIFLDAGGSP 180 SITVSRGGGI VVVCMWQVHR EVKAGLGMAR LVWALDIAFF WASWTVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22170.2 | 3e-07 | FAR1 family protein |